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Nitin Bhardwaj

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Contact      
  Email nbhard2@***
  Phone (312) **3-2015
  Address

Medical Sciences Building (MSB)
Room: W103
820 S. Wood Street
Chicago IL, 60612

       
Education Indian Institute of Technology (IIT) Bombay, India
Bachelor of Technology in Chemical Engineering
awarded May, 2003
       
Profile

Organizations & Community Service
Experience Bioengineering @ UIC 2004
Student Representative, UIC chapter of EMBS
Winner, FMC Technologies Inc Fellowship Award for 2005-2006
Winner, FMC Technologies Inc Fellowship Award for 2006-2007

       
Research

Relating Protein-Protein Interactions with Gene Expression
Prediction of DNA-Binding Proteins and DNA-Binding Residues
Prediction of Membrane-Binding Proteins
Simulation of Membrane-Protein Binding

   
Publications
2004
   
Improvement of alignment accuracy utilizing sequentially conserved motifs
[1]
Chakrabarti S., Bhardwaj N., Anand,P.A., Sowdhamini R.
  BMC Bioinformatics. 2004 Oct 28;5(1):167
     
2005
   
  Correlation between gene expression profiles and protein-protein interactions within and across genomes.
[2]
Bhardwaj N. and Lu H.
  Bioinformatics, 2005, 21; pp.2730-2738
   
  SCANMOT: Searching for similar sequences using simultaneous scan of multiple sequence motifs
[3]
Chakrabarti S., Anand,P.,Bhardwaj N. Pugalenthi G. and Sowdhamini,R.
  Nucleic Acids Research, 2005, 33,W274-W276
     
  Structure Based Prediction of Binding Residues on DNA-binding Proteins
[4]
Nitin Bhardwaj, Robert E. Langlois, Guijun Zhao and Hui Lu
  26th Annual International Conference of the Engineering in Medicine and Biology Society (in press)
     
  Kernel-based machine learning protocol for recognizing DNA-binding proteins
[5]
Nitin Bhardwaj, Robert E. Langlois, Guijun Zhao and Hui Lu
  Nucleic Acid Research 33, 6486-6493
     
2006
   
  Structural Bioinformatics Prediction of Membrane-Binding Proteins
[6]
Nitin Bhardwaj, Robert V. Stahelin, Robert E. Langlois, Wonhwa Cho, and Hui Lu
  Journal of Molecular Biology 359, 486-95
   
  Residue-Level Prediction of DNA-Binding Sites and its Application on DNA-Binding Protein Predictions
[7]
Nitin Bhardwaj, and Hui Lu
  FEBS Letters (In Press)
   
  Co-expression among constituents of a motif in the protein-protein interaction network
[8]
Nitin Bhardwaj, and Hui Lu
  (Submitted)